Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854573.1_cds_XP_016512595.1_25222
CDS Infomation

[gene=LOC107829652] [db_xref=GeneID:107829652] [protein=isocitrate lyase-like] [protein_id=XP_016512595.1] [location=join(32416..32445,33065..34667,35095..35189)] [gbkey=CDS]
Sequence

ATGGCTGCATCTTTCTCAGTTCCATCAATGATAATGGAAGAGGAAAGGAGATTTGAATCA
GAGGTAGCAGAGGTGCAAGCATGGTGGAACTCAGAGAGGTTCCAGCTAACAAAGAGGCCA
TATTCAGCTAGGGATGTGGTGGCACTAAGAGGTACTATGAGACAAAGCTATGCATCCAAT
GAGTTAGCGAAGAAATTGTGGAGAACACTCAAAACTCACCAAGCCAACGGCACTGCCTCC
AGAACTTTTGGTGCACTTGACCCTGTTCAAGTCACTATGATGGCCAAACATTTGGACTCT
ATCTATGTTTCTGGTTGGCAGTGTTCTTCCACTCACACCACATCCAATGAACCAGGTCCT
GATCTTGCTGATTACCCTTATGACACTGTTCCAAACAAAGTGGAACATCTGTTCATGGCT
CAACAGTATCATGATAGGAAACAAAGGGAAGCAAGAATGAGCATGAGCAGAGAAGAAAGG
GCTAGAACTCCTTTCATTGATTATTTGAAGCCCATTATTGCTGATGGTGATACTGGATTT
GGTGGTGCTACTGCTACTGTCAAGCTTTGTAAGCTTTTCGTCGAGCGCGGTGCTGCTGGG
GTCCACATTGAGGACCAGTCATCTGTGACCAAGAAATGTGGTCATATGGCGGGTAAAGTT
CTTGTTGCTATTAGTGAACATATTAACAGGTTGGTGGCTGCAAGATTGCAGTTTGATGTT
ATGGGAACGGAGACGGTTCTTGTCGCTCGTACTGATGCTGTAGCAGCAACCCTGATCCAA
ACCAATGTGGATACAAGGGATCACCAGTTTATCTTGGGTGTATCGAACCCGAATCTCAAA
GGGAAAAGTTTGGCTACTCTTATGTCCGAAGCTATGGCAGCGGGCAAAACCGGGCCTGAA
CTTCAAGCCCTTGAGGATAAATGGCTGGCAATGGCTGAACTCAAGACATTTTCTCAATGT
GTGGTTGATGCAATCAAGAAAATGAACGTTACGGAGTTCGAAAAACAGAGGAGATTGAAC
GAGTGGATGGCTCATTCAAGTTTTGAAAACTGCCTTTCACATGAGCAAGCTCGTGAAATT
ACTGAAAGACTTGGACTTCCAAATCTTTTCTGGGATTGGGATTTGCCTAGAACCAGAGAA
GGGTTCTACAGGTTTCAGGGTTCAGTAGAGGCTGCAGTTGTACGTGGTTGGGCTTTTGCA
AACCATGCTGATATAATATGGATGGAAACCTCGAGTCCTGATATGGTTGAATGCACAAAA
TTTGCCGAGGGAGTTAAGTCAATGAGGCCTCAAATTATGTTGGCTTATAATCTATCTCCA
TCTTTCAATTGGGATGCATCAGGAATGAATGATGCACAAATGATGGATTTCATTCCAAGA
ATAGCCAAGTTGGGTTACTGTTGGCAGTTCATTACTTTGGCTGGTTTCCATGCTGATGCC
CTTATTGTTGACACGTTTGCTAAGGATTTCGCAAGGAGGGGAATGCTGGCCTATGTGGAG
AAAATACAGAGAGAGGAGAGAGCCCATGGAGTTGACACATTGGCTCATCAAAAATGGTCT
GGTGCTAATTACTATGATAGAGTTCTGAGGACTGTCCAAGGAGGTATCACCTCTACTGCT
GCTATGGGCAAAGGAGTGACTGAGGAGCAATTTGAGGAGAAGTGGACAAGGGAAGGAACA
ACAAATTTGGGTGATGGAAGTATGGTGATTGCAAAGGCAAGGATGTAA

Peptide Sequence

PEP ID

XP_016512595.1
PEP Infomation

PREDICTED: isocitrate lyase-like [Nicotiana tabacum]
Sequence

MAASFSVPSMIMEEERRFESEVAEVQAWWNSERFQLTKRPYSARDVVALRGTMRQSYASN
ELAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSSTHTTSNEPGP
DLADYPYDTVPNKVEHLFMAQQYHDRKQREARMSMSREERARTPFIDYLKPIIADGDTGF
GGATATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDV
MGTETVLVARTDAVAATLIQTNVDTRDHQFILGVSNPNLKGKSLATLMSEAMAAGKTGPE
LQALEDKWLAMAELKTFSQCVVDAIKKMNVTEFEKQRRLNEWMAHSSFENCLSHEQAREI
TERLGLPNLFWDWDLPRTREGFYRFQGSVEAAVVRGWAFANHADIIWMETSSPDMVECTK
FAEGVKSMRPQIMLAYNLSPSFNWDASGMNDAQMMDFIPRIAKLGYCWQFITLAGFHADA
LIVDTFAKDFARRGMLAYVEKIQREERAHGVDTLAHQKWSGANYYDRVLRTVQGGITSTA
AMGKGVTEEQFEEKWTREGTTNLGDGSMVIAKARM

Transcript Sequence

Gene sequence data has not been registered.